Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGKSISVKSYANIAIIKYWGKADAEKM-IPATSSISLTLENMYTETRLTTLGKDAKKDEFYISGVLQNDHEHDKMSAILDRFRQ--NKSGFVKIETTNNMPTAAGLSSSSSGLSALVKACNDFFGTNLSQSQLAQEAKFASGSSSRSFFGPVAAWDK----DSGD-----IYKVHTDLDLAMIMLVLNDKRKPISSREGMKICTETSTTFNEWVRQSEQDYQDMLVYLKNNDFQKVGQLTERNALAMHSTTKTATPAFSYLTEETYKAMDVVKKLREKGHECYYTMDAGPNVKVLCLRQDLEALAAILE--KDYRIIVSTTKELADG |
| 4Z7C Chain:A ((2-317)) | ---KSVTVSAPSNIAVVKYWGKRGDERLNLPLNNSLSITLDDQLSVITKVTL--NDKNIVIVNDRILSEDEMKEYAGRVLDTFKKIVGKEFHVKVESKSKFPINAGLASSAAGIAALAFSLNELLELNLKSEELSKIARLGSGSACRSMFGGFVVWNKGEREDGEDSYCYQIFRHDYWSELVDIIPILSEKEKKISSRKGMIRSAETSELMECRLKYIEKTFNEVIEAIRNRDEKKFYYLMMRHSNSMHAVILDSWPSFFYLNDTSIRIMEWIHDYGKAG----YTFDAGPNPHIFTTERNIGDILEFLKSLEIKRIIVS---KVGDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z7C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55505 for 2508 contacts (-22.1/contact) +
2D Compatibility (PS) -32524 + (NN) -10447 + (LL) 316
1D Compatibility (HY) -21200 + (ID) 4900
Total energy: -124260.0 ( -49.55 by residue)
QMean score : 0.450
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