Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNIFKRLNGKEWLMIVASTILVCLAVWMDLKTPEYMSDITRMLQTKGTKLEALWDPGLKMLAFSFGSFLVAVMVGFLGARTAASFTSRLRSDIFNHVMDYSDAEIKRFSIPSLLTRTTNDLTQLQILIVMGMQVVTRGPIMAIWALTKIWGKSDQWTGAVGVAVIIVMILLSVLLLLAFPRQ---------RQIQGFTDALNATTREALSGVRVIRAYNAEKYQTDKFKRENDDLTKLNLFVYRLMSLMNPV-MTVVSSGLTLAIYWIGSYLINDISVPKVTGTSVSVLAAKSAITDRVDLFSNMVVFSSYAMQVVMGFMMMVAIFIIMP---RALVSARRINEVLTLAPTVTFKENSHIQSAQ----KGQIEFQDVSFHY-SKDSEAVIEHVSFKADTGQTVAFIGSTGSGKSTLVNLVTRFYDATE---GAIKLDGIDIKEYSHNDLNNKIGYIPQKAVLFSGTVRSNMILGESGREELSDEEIWQALELAQAKEFIEAKEKGLDTEVAQGGSNFSGGQKQRLAIARALARHPEILIFDDSFSALDYKTDHILRHELKEKTAA--MTKLIVAQRISTIMDADLILVLDQGKVVGQGTHKEL--LSNNEVYQEIAYSQLSKEELENEN |
| 3WMF Chain:A ((173-597)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------VLIALSPLVVLAVVVQMIEMSGNTKRSSEAYASA-GSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFFGLSMLVIFCVYALALWWGGQ------------------LIARGSL----NLGNLLTAFFS----AILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYG---KRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141265 for 2757 contacts (-51.2/contact) +
2D Compatibility (PS) -42361 + (NN) -11990 + (LL) 17164
1D Compatibility (HY) -33600 + (ID) 7250
Total energy: -219302.0 ( -79.54 by residue)
QMean score : 0.388
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