Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFN---TLNPNRKLRLEREKLAKEKG
3C9P Chain:A ((59-75))
--------------------------YGDFFRQAPYYVPERIAITGKICGVRIEE
General information:
TITO was launched using:
RESULT:
Template:
3C9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -765 for 37 contacts (-20.7/contact) +
2D Compatibility (PS) -1513 + (NN) -1559 + (LL) 1040
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -4147.0 ( -112.08 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3C9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C9P-query.scw
PDB file :
Tito_Scwrl_3C9P.pdb
: