Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVATEKY-EAIKEKLPNADNETIAILMAINALSVQLSREI---DIEKMEDELNKLRSKTISDIKEKVSED
1TKY Chain:A ((39-140))
---RVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWH
General information:
TITO was launched using:
RESULT:
Template:
1TKY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 22042 for 513 contacts (43.0/contact) +
2D Compatibility (PS) -10466 + (NN) -2422 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: 1468.0 ( 2.86 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1TKY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TKY-query.scw
PDB file :
Tito_Scwrl_1TKY.pdb
: