Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPES---------WDK----WVQKKSAKAVAGAKAFLKYANEKGIKIYYVSDRTDAQVDATKENL-EKEGIPVQGKDHLLFLKKGMKSKESRRQAVQKDTNLIMLFGDNLVDFADFSKSSSTDREQLLTKLQSEFGSKFIVFPNPMYGSWESAIYQGKHLDVQKQLKERQKMLHSYD |
| 2B8J Chain:A ((34-166)) | ----------------------------------------------------------------------------------------------GRPPMAVGFDIDDTVLFSSPGFWRGKK---TFSPESEDYLKNPVFWEKMNNGWDEFSIPKEV--ARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIF--AGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2B8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -6387 for 825 contacts (-7.7/contact) +
2D Compatibility (PS) -12668 + (NN) -5736 + (LL) 8816
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -24825.0 ( -30.09 by residue)
QMean score : 0.444
|
|
|