Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLMWDVLTGKESVRTLKKQLDKELIHSVYAPRKRSKFHDIITSHHKEI----DEVAINTKTAIHKVANQLDEAIKGEFRSKVEESIESNQQKYNHL
1DKY Chain:A ((146-205))
--------------------------------QTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKL
General information:
TITO was launched using:
RESULT:
Template:
1DKY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -257 for 333 contacts (-0.8/contact) +
2D Compatibility (PS) -5864 + (NN) -469 + (LL) 2752
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -6588.0 ( -19.78 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1DKY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DKY-query.scw
PDB file :
Tito_Scwrl_1DKY.pdb
: