Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIHDMIKTIEHFAETQADFPVYDILGEVHTYGQLKVDSDSLAAHIDSLGLVEKSPVLVFGGQEYEMLATFVALTKSGHAYIPVDQHSALDRIQAIMTVAQPSLIISIGEFPLEVDNVPILDVSQVSAIFEEKTP--YEVTH---SVKGDDNYYIIFTSGTTGLPKGVQISHDNLLSFTNWMISDDEFSVPERPQMLAQPPYSFDLSVMYWAPTLAMGGTLFALPKTVVNDFKKLFATINELPVQVWTSTPSFADMALLSNDFNSETLPQLTHFYFDGEELTVKTAQKLRQRFPKARIVNAYGPTEATVALSAVAITDEMLETCKRLPIGYTKDDSPTYVIDEEGHKLPNGEQGEIIIAGPAVSKGYLNNPEKTAEAFFQFEGLPA---YHTGDLGSMTDEGLLLYGGRMDFQIKFNGYRIELEDVSQNLNKSQYV-KSAVAVPRYNKDHKVQ-NLLAYIVLKEGVRDDFERDLDLTKAIKEDLKDIMMDYMMPSKFIYREDLPLTPNGKIDIKGLMSEVNK |
| 1AMU Chain:A ((66-523)) | -----------------------------TYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF--NGQVE-IFEEDTIKIREGTNLHVPSKSTDLAYVIYTS-----PKGTMLEHKGISNLK--VFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVV------HLDPERILSIQTLITAGSATSPSLVNKWKE---KVTYINAYGPTETTICATTWVATKETI--GHSVPIGAPIQNTQIYIVDENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSV---HKDHQEQPYLCAYFV--------SEKHIPLEQ-LRQFSSEELPTYMIPSYFIQLDKMPLTSNGKIDRKQLPEPDLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225685 for 3687 contacts (-61.2/contact) +
2D Compatibility (PS) -47493 + (NN) -17402 + (LL) 4236
1D Compatibility (HY) -30400 + (ID) 7100
Total energy: -323844.0 ( -87.83 by residue)
QMean score : 0.483
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