Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKFGFLSVLEEELDKHLQYDF-----AMDWDKKNHTVEVTF----------ILEAQNSSAIETVDDQGETS----SEDIVFEDYVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAETLNEVATEGLSDLMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY |
1E4F Chain:T ((63-149)) | -----LLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQSEALEKLKENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5884 for 277 contacts (-21.2/contact) +
2D Compatibility (PS) -7189 + (NN) 1536 + (LL) 376
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -18661.0 ( -67.37 by residue)
QMean score : 0.096
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