Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYK-AWFVQEGQDPFQVKFE-ETIELPAF-QSMIQFDTLQACEVKYNIYFKANGIKEVR
3O0L Chain:A ((38-109))
-------------------------------GFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTALSPNATAVRCELYVREAIS----
General information:
TITO was launched using:
RESULT:
Template:
3O0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6083 for 391 contacts (-15.6/contact) +
2D Compatibility (PS) -7149 + (NN) 1584 + (LL) 2360
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -12238.0 ( -31.30 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_3O0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O0L-query.scw
PDB file :
Tito_Scwrl_3O0L.pdb
: