Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTSTSDPDYAFYVKKLKSIHTPPLYS
3DZY Chain:D ((50-90))
-------AIECRVCGD-KASGFH-YGVHACEGCK------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9800 for 144 contacts (-68.1/contact) +
2D Compatibility (PS) -2520 + (NN) 375 + (LL) 2540
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -11005.0 ( -76.42 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_3DZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DZY-query.scw
PDB file :
Tito_Scwrl_3DZY.pdb
: