Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQTKKLCHVYEIETPLVSYHEHNKESSGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVP------QPFFFYGFLNRQKKE-KKKELEALKKRQETIIFYEAPHRLKETLSAMAEILGD-REIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ |
| 3NDC Chain:A ((2-234)) | ------------SHMTVHFIGAGPGAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAAGQDVARL-HSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGRASAMPAGETLENFARTGAVLAIHLSVHVLDEVVQKLVPHYGEDCPVAIVWRASWPDQRVVRATLATLQTSLG-AELERTALILVGRSLATE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115292 for 1794 contacts (-64.3/contact) +
2D Compatibility (PS) -24067 + (NN) -10566 + (LL) 5408
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -149717.0 ( -83.45 by residue)
QMean score : 0.444
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