Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGAC-QSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN
3F4W Chain:A ((79-198))-----------------------------------------------------------------------------------------------------------DYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVD-DLPARVRLLEEAGADMLAVHTG--TDQQA---AGR------KPIDDLITMLKV-RR--KARIAVAGGISSQTVKDYALLGPDVVIVG-SAITHAADPAG------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3F4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46773 for 840 contacts (-55.7/contact) +
2D Compatibility (PS) -13067 + (NN) -7173 + (LL) 13128
1D Compatibility (HY) 2000 + (ID) 900
Total energy: -52785.0 ( -62.84 by residue)
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_3F4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F4W-query.scw
PDB file : Tito_Scwrl_3F4W.pdb: