Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGAC-QSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN |
3F4W Chain:A ((79-198)) | -----------------------------------------------------------------------------------------------------------DYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVD-DLPARVRLLEEAGADMLAVHTG--TDQQA---AGR------KPIDDLITMLKV-RR--KARIAVAGGISSQTVKDYALLGPDVVIVG-SAITHAADPAG------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46773 for 840 contacts (-55.7/contact) +
2D Compatibility (PS) -13067 + (NN) -7173 + (LL) 13128
1D Compatibility (HY) 2000 + (ID) 900
Total energy: -52785.0 ( -62.84 by residue)
QMean score : 0.393
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