Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELAED-EVRVSSHNRFVPDDQRNLAYQAAKLI------KDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHPDVQGMIEAIEEKSFQKMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 2WW4 Chain:A ((1-257)) | MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISI-ELRDDGDIRLLTPVEGV-EHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVD-PPEKWYLVAHPGVSIPTPVIFKDPEL---PRNTPKRSIETLLKCEFSNDC-------EVIARKRFREVDAVLSWLLEYAPSR--LTGTGACVFAEFDTESEARQV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107151 for 2056 contacts (-52.1/contact) +
2D Compatibility (PS) -26542 + (NN) -5260 + (LL) 2176
1D Compatibility (HY) -18400 + (ID) 4100
Total energy: -159277.0 ( -77.47 by residue)
QMean score : 0.397
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