Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNNSFYEDEHT-------TEKEWKDQIRYNILLEDL----LTRDIDISNKELESFYNKNKELYQFDDSYRIRHIVVK------------DEEEAREVLKELKGGSSFEAVAAERSTDRYTSPYGGDLGF--VTEASDNIPSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKE-KLKARTFSFDEVKDQIRRQIAMDQLGDKATVKTLWKEADVSWFYGEKSTK |
| 1M5Y Chain:A ((71-293)) | ----------------------------------------------------------------MERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQV-------TELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQAL-NGGQMGWGRIQE----LPGIFAQALSTAKKGDIV-GPIRSGVGFHILKVNDLRGESKNISVTEV-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18018 for 1062 contacts (-17.0/contact) +
2D Compatibility (PS) -20597 + (NN) -12388 + (LL) 8356
1D Compatibility (HY) -12800 + (ID) 2200
Total energy: -57647.0 ( -54.28 by residue)
QMean score : 0.531
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