Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
1DY3 Chain:A ((2-135))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95563 for 1003 contacts (-95.3/contact) +
2D Compatibility (PS) -13797 + (NN) -3272 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -123344.0 ( -122.98 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1DY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DY3-query.scw
PDB file :
Tito_Scwrl_1DY3.pdb
: