Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGAAEEQSEFDLILAGAGSQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK
1B9M Chain:A ((112-197))
-----------------LPLNSLLAAISR-FSLQTSARNQWFGTITARDHDDVQQHVDVLLAD-GKTRLKVAITAQSGARLGLDEGKEVLILLKAPWV-GITQDEA-----------------
General information:
TITO was launched using:
RESULT:
Template:
1B9M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5345 for 469 contacts (11.4/contact) +
2D Compatibility (PS) -8992 + (NN) 356 + (LL) 4212
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -6479.0 ( -13.81 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1B9M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B9M-query.scw
PDB file :
Tito_Scwrl_1B9M.pdb
: