Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSMIAKQQRTPKFKVQEYTRCERCGRPHSVIRKFKLCRICFRELAYKGQIPGVKKASW
1XNR Chain:N ((2-61))
-ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
1XNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27327 for 326 contacts (-83.8/contact) +
2D Compatibility (PS) -5988 + (NN) -1780 + (LL) 208
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -44187.0 ( -135.54 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1XNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNR-query.scw
PDB file :
Tito_Scwrl_1XNR.pdb
: