Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRIDPSKLELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLIEVPMVGTTIPHEIIGRFGAGNILLKPASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPINMIRATLQGLSELKRAEDVAKLRGKSVEELLG
1I94 Chain:E ((4-151))
---------DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLR---------
General information:
TITO was launched using:
RESULT:
Template:
1I94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78038 for 1187 contacts (-65.7/contact) +
2D Compatibility (PS) -15839 + (NN) -4544 + (LL) 1052
1D Compatibility (HY) -13600 + (ID) 4150
Total energy: -115119.0 ( -96.98 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1I94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I94-query.scw
PDB file :
Tito_Scwrl_1I94.pdb
: