Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFIRILPGDKVTVELSPYDLTRGRITYRYK
2OQK Chain:A ((30-96))
----EEGQEYGQVQRMLGNGRLDAYCFDGQKRLCHIRGKMRK-KVWVNPGDIVLVSLRDFQDSKGDIILKYT
General information:
TITO was launched using:
RESULT:
Template:
2OQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37338 for 434 contacts (-86.0/contact) +
2D Compatibility (PS) -7181 + (NN) -1212 + (LL) 384
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -48247.0 ( -111.17 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2OQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQK-query.scw
PDB file :
Tito_Scwrl_2OQK.pdb
: