Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAAARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGCRPPKRRRV
4X66 Chain:K ((11-126))
--------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR-
General information:
TITO was launched using:
RESULT:
Template:
4X66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26924 for 867 contacts (-31.1/contact) +
2D Compatibility (PS) -12921 + (NN) -10206 + (LL) 1496
1D Compatibility (HY) -8800 + (ID) 3400
Total energy: -60755.0 ( -70.07 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4X66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X66-query.scw
PDB file :
Tito_Scwrl_4X66.pdb
: