Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE |
| 2LLW Chain:A ((528-580)) | ------------------------------------------------------------------------------------EETYQRAMKDPEVAA----------------IMQDPVMQSILQQAQQNPA---ALQEHMKNPEVFKKIQTLI----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LLW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7258 for 295 contacts (-24.6/contact) +
2D Compatibility (PS) -5993 + (NN) -4501 + (LL) 9784
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -11068.0 ( -37.52 by residue)
QMean score : 0.426
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