Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATW--GVNTCIISLKGLD--NADDRFVLPEVN-------TALALFPLSIAADCLLMLPCISVVMSISSVMKSVTVE
3C3J Chain:A ((296-363))
-----------------------------------LAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALM-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3C3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3080 for 198 contacts (-15.6/contact) +
2D Compatibility (PS) -4868 + (NN) 259 + (LL) 5560
1D Compatibility (HY) 1200 + (ID) 150
Total energy: -1079.0 ( -5.45 by residue)
QMean score : -0.052
(partial model without unconserved sides chains):
PDB file :
Tito_3C3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3J-query.scw
PDB file :
Tito_Scwrl_3C3J.pdb
: