Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MNSLSLVFWSILA------------VVGLLLFIKFKPPTIASLLLSKDEAKEISIQFIKEFVGI--DVENWDFYSVYWYDHDTVNKLHHLGILKKNRKVLYDVG-------LVESWRVRFVHQNQSFVVGV-------NANREIT-----FFYADVPKKTLSGKFEQVSPETLKQRLMASPDGLWSRANMTGTGKKEEDFREVSTYWYIAEAG-DIRLKVTVELQGGRISY---------------IGTEQEILTDQMSKVIRDEQVESTF---GVSGMLGSALAMILAILILVFM-------------DVQTSIIFSLVLGLLIIICQSLTLKEDIQLTIVNAY-------DARMSVKTVSLLGILSTLLTGLLTGF-----VVFICSLAGNALAGDFGWKTFEQPIVQI----FYGIGAGLISLGVTSLLF---NLLEKKQYLRISPELSNRTVFLSGFTFRQGLNMSIQSSIGE-EVIYRLLMIPVIWWM---SGNILISIIV----------SSFLWAVMHQVTGYDPR--WIRWLH------------LFIFGCFLGVLFIKFGFICVL--VAHFIHNLVLVCMPLWQFKLQKHMH-HDQPKHTSL--- |
4WVM Chain:A ((4-703)) | DLVMPALGRPFTLGMLYDARREKLISSNAQRSSEFKIVASDSTESKSSAMDIEASLGVSFLGGLVEVGGSAKYLNNTKKYQNQSRVTLKYKATTVYKQFTHVVTSILYGANAFFVSDSDKVDIQGKMEAAIKKIPTISILTDEEKSLASNLSCKFHGDFLLESLPTTFEDAVKTYQTLPTNSVPMKVWLAPNVSKVRRIHTTLEELHKLKRRANEAMDVKLVQRIPLIHDKISNFQQIFQDYMLTVQKKIAEKLPLVREQSLQKIIDDRAQSPFSNEKVSKWLDAVEREIAVLKSCAGMVEGTQAKFVSNQTELDREVLVGKVKHAVCFIFTSVE-RNDPYLKVLSDYWESSTEDKWCFSTEVVLKMQQRAQTFCDHVNDFEKSRNVGFFITALENGKFQGASIYYYKEGSLATQDFTFPRMPFVQGYKKRSDLLWYACDLTFDRNTINNWISLSNDTFAASEHGKRQNYPKHPERFVSFNQVLCNEGLMGKHYWEVEWNGYIDVGIAYISIPRKIDFASAFGYNTYSWVLSYNPKIGYIERHKKREYNVRAPNPGFKRLGLFLDWRYGSISFYAVSSDEVHHLHTFK----TKFTEPVYPAFSIGPAGNHGTLRLL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -256032 for 3385 contacts (-75.6/contact) +
2D Compatibility (PS) -51271 + (NN) 5619 + (LL) 808
1D Compatibility (HY) -10800 + (ID) 4150
Total energy: -315826.0 ( -93.30 by residue)
QMean score : 0.064
|
|
|