Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALR--LQLFYLEDQCHGQAVFESLYQQIEYISELTNEFNL-------YSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYK---PADQDVIWMSNTLWMERLFDNIFQNTLRHSKA----KKMEVTIEHGD----VFIRDDGIGFDRNESSEGLGLKIIEDTCRL-LAITYELHTNDNGTGFLFSKE |
| 4JAS Chain:A ((13-220)) | -------------------------------------------------------------------------------------------------------------------------LKRIDRMKTEFIANISHELRTPLTVIKGYAEMIY---NSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEA-YIDPTRIRQVLL-NLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKD-----RIFEQFYRVDSSLTYEVPG--TGLGLAITKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54948 for 1164 contacts (-47.2/contact) +
2D Compatibility (PS) -20187 + (NN) -9872 + (LL) 12112
1D Compatibility (HY) -14000 + (ID) 2500
Total energy: -89395.0 ( -76.80 by residue)
QMean score : 0.350
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