Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEFTHLVNERRSASNFLSGHPITKEDLNEMFELVALAPSAFNLQHTKYVTVLDQDVKEKLKQAANGQYKVVSSSAVLLVLGDKQAYQQAADIYEGLKVLGILNKQEYDHMVQDTVSFYENRGEQFKRDEAIRNASLSAMMFMLSAKEKGWDTCPMIGFDAEAVKRILNIDDQFEVVMMITIGKEKTESRRPRGYRK---PVNEFVEYM
3H4O Chain:A ((22-188))---FVELAKKRYSCRNY-QDRKVEKEKLEKVLDVARIAPTGGNRQPQRLIVIQEKEGINKLSKAAN----IYDAPLAILVCGDKDKVWTRP--FDGKQLTDIDTSIVTDHM-------------------------------MLQATELGLASVWVCYFNPDIIREEFSLPDNLEPINILLMGYESKIPESPERHEKTRVPLSEIVSY-


General information:
TITO was launched using:
RESULT:

Template: 3H4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 725 -80147 -110.55 -488.70
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -110.55
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.621

(partial model without unconserved sides chains):
PDB file : Tito_3H4O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H4O-query.scw
PDB file : Tito_Scwrl_3H4O.pdb: