Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGYLVLEDGTSFSGELDGHENCTGEAVFFTGMTGYQEVLTDPSYKGQIIVFTYPLIGNYGINEKDFESKKPQVKAAVVYEACDHFSHYEAVYSLKEYLQKWNIPLLTHVDTRAVVKKIRANGTMGATVTASKEGAEIALQPENVAEQASAQEISTFGDGNKHIALIDFG--YKKSIASSLVKRGCKVTVVPYQQ-MEAVYNIKPDGIVLSNGPG---DPKAIQPYLGKIKSIISRFPTLGICLGHQLIALAFGGNTFKLPFGHRGANHPVIDRKTKRVFMTSQNHSYVVDEQSINEEELTIRFHHVNDTSVEGLAHKKLPVMSVQFHPEAHPGPAESEWIFDDYLKNVIPARREIAHA
2YWC Chain:A ((2-120))-------------------------------------------------------------------------------------------------------------------------------------------------------------------VLVLDFGSQYTRLIARRLRELRAFSLILPGDAPLEEVLKHRPQALILSGGPRSVFDPDAPRP---DPRLFSSGLPLLGICYGMQLLAQELGGRV------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 363 -59934 -165.11 -705.10
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -165.11
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_2YWC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YWC-query.scw
PDB file : Tito_Scwrl_2YWC.pdb: