Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRLVEENKLKQKLGHKQADSILTLLKLANEKHITL
1LLM Chain:C ((74-87))----------------------------------------------------------LENEVARLKKLVGE--------------------


General information:
TITO was launched using:
RESULT:

Template: 1LLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 3 376 125.33 26.86
target 2D structure prediction score : 0.86
Monomeric hydrophicity matching model chain C : 0.51

3D Compatibility (PKB) : 125.33
2D Compatibility (Sec. Struct. Predict.) : 0.86
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.922

(partial model without unconserved sides chains):
PDB file : Tito_1LLM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LLM-query.scw
PDB file : Tito_Scwrl_1LLM.pdb: