Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALKAQNTISGKEGRLFLDGEEMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGTATFYKVTSKFVLLMMDYVKKGSD-PYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLDVDSEALEEEVPFTFEDFDVPEKLSDTF
3V4H Chain:A ((23-134))---------------------NEIQVLAWNWDVAQH------------------KASVSDFCFAHYIDKASPNLLSYCLLGKHIKNVQFVLRK----P-LEYLTIKFTDVIITRVDMAGSLED--RPREEIRFSFTK-----------


General information:
TITO was launched using:
RESULT:

Template: 3V4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 310 -34445 -111.11 -382.72
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -111.11
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_3V4H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V4H-query.scw
PDB file : Tito_Scwrl_3V4H.pdb: