Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFKKLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPLSEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLMLLLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS
3GWH Chain:B ((11-106))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLMLLLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHL--------


General information:
TITO was launched using:
RESULT:

Template: 3GWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 198 -38448 -194.18 -400.50
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -194.18
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.732

(partial model without unconserved sides chains):
PDB file : Tito_3GWH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GWH-query.scw
PDB file : Tito_Scwrl_3GWH.pdb: