Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQWMELANRVLAGAEVTDEEALSILHCPDEDILLLMHGAFHIRKHFYGKKVKLNMIMNAKSGLCPENCGYCSQSAISKAPIESYRMVNKETLLEGAKRAHDLNIGTYCIVASGRGPSNREVDQVVDAVQEIKETYGLKVCACLGLLKPEQAKRLKDAGVDRYNHNLNTSQRN-HSNITTSHTYDDRVNTVEIAKESGLSPCSGAIIGIK-ETKQDVIDIAKSLKALDADSIPVNFLHAIDGTPLEGVNELNPLYCLKVLALFRFINPSKEIR--------ISGGREVNLRSLQPLGLYAANSIFVGDYLTTAGQEETEDHKMLSDLGFEVESVEEMKASLSAKS
5FF2 Chain:A ((35-284))-----------------------------------LFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYCGLRRDNKN-LKRYRMTPEE-IVERARLAVQFGAKT-IVLQSGEDPYYMP-DVISDIVKEIKKM-GVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLR------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1190 -98753 -82.99 -411.47
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -82.99
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_5FF2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FF2-query.scw
PDB file : Tito_Scwrl_5FF2.pdb: