Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAIKLVQSPNGNFAASFVLDGTKWIFKSKYYDSSKGYWVGIYEVWDRK
1Q3J Chain:A ((1-36))CIK-----NGN---GCQPNGSQGNCCSGYCHKQPGWVAGYCR---RK


General information:
TITO was launched using:
RESULT:

Template: 1Q3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 106 -7114 -67.11 -197.61
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -67.11
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_1Q3J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q3J-query.scw
PDB file : Tito_Scwrl_1Q3J.pdb: