Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDMLYWLLIAAVFIIAFIGLVYPVI-------------PSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAAVLFAADYVSNLLGVKRFGGSKAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQKDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL
6PRC Chain:M ((146-231))-----WNFAAAIFFVLCIGCIHPTLVGSWSEGVPFGIWPHIDWLTAFSIRYG-NFYYCPW-HGFSIGFAYGCGLLFAA-HGATILAVARFGGDR-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6PRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 96 -25321 -263.76 -346.86
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain M : 0.50

3D Compatibility (PKB) : -263.76
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.123

(partial model without unconserved sides chains):
PDB file : Tito_6PRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6PRC-query.scw
PDB file : Tito_Scwrl_6PRC.pdb: