Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRKNKKNSKAAEKALKVTINGKEETVYEQETPETEANKSMTFSNWEEKRQAEQEVAASQEHPDEDEFNWDSEEDKVFKEDPKVVPPFQKKKTKLYAKGKTGAAKPVKRVAATIAFAAVIGTGLGLFALNISGNKEASAPASLEDSLGSQTAKAGDTSADKQTSGAEKQAAQTEGTYKTYAVQAGKFSNEKGAETLTEQLTEKGYSAVSLSK------DDGYTYVIAGLASEKEVSQQLGQVLIDSDFEAWGGKELSLSIESDMTDSFKETAELAAKAILDEDITKASVEKIEKSLGETKAS---ETGEKKAILQALKE--LEDPSAEAGWKAQQELLAVVK
3LEZ Chain:A ((20-166))----------------------------------------------------------------------------------------------------------------------------------------------------------AIDTGADKEISYRENERFAYTSTFKPLAV--GAVLQTKSDEELEETITYSEEDLVTYSPITEQHVDEGMTLVEIADAAIRYSDNTAGNLLL----EAMGGPD---ELETILRDIGDETIEM---------------DRYETELNEAKPGDIRDTSTAKAMATTLQQYVLED------------------


General information:
TITO was launched using:
RESULT:

Template: 3LEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 592 60214 101.71 442.75
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 101.71
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.229

(partial model without unconserved sides chains):
PDB file : Tito_3LEZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LEZ-query.scw
PDB file : Tito_Scwrl_3LEZ.pdb: