Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPIGRSLQGVTGRPDFQKRLEQMKEKVMKDQDVQAFLKENEEVIDQKMIEKSLNKLYEYIEQSKNCSYCSEDENCNNLLEGYHPKLVVNGRSIDIEYYECPVKRKLDQQKKQQSLMKSMYIQQDLLGATFQQVDISDPSRLAMFQHVTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEKEYSSMIVYVPEFVRELKNSLQDQTLEEKLNMVKTTPVLMLDDIGAESMTSWVRDEVIGTVLQHRMSQQLPTFFSSNFSPDELKHHFTYSQRGEKEEVKAARLMERILYLAAPIRLDGENRRHP
1SXJ Chain:C ((33-80))---------------------------------------------------------------------------------------------------------------------------------------------------VITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 77 -17868 -232.05 -372.25
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.60

3D Compatibility (PKB) : -232.05
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_1SXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SXJ-query.scw
PDB file : Tito_Scwrl_1SXJ.pdb: