Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPSVESFELDHNAVVAPYVRHCGVHKVGTDG-VVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDISPMGCQTGYYLVVSGEPTSAEIVDLLEDTMKEAVE-IT--EIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG
4XCH Chain:D ((46-182))--------LDHTIVKAPYIRLIS-EEVGPKGDIITNFDIRLIQPNENAMDTAGLHTIEHLLAKLIRQRID-----GLIDCSPFGCRTGFHMIMWGKQDSEKIAQVIKSSLEEIAEGITWEDVPGTTIESCGNYKDHSLHSAKEWAKLILSQ----------


General information:
TITO was launched using:
RESULT:

Template: 4XCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 563 -6835 -12.14 -51.39
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -12.14
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_4XCH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XCH-query.scw
PDB file : Tito_Scwrl_4XCH.pdb: