Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSD---------ISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDI--VKETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEELDLNYITDQSIHFQLFELEKNEFVRNLPPQRNCRELRESLKKLGMG
1QG8 Chain:A ((1-255))-PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTR-------Y-AAL-INQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSAS--KTYHLN---DIVKETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEELDLNYIT--------------EFVRNLPPQRNCRELRESLKKLGMG


General information:
TITO was launched using:
RESULT:

Template: 1QG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1186 -10743 -9.06 -47.32
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -9.06
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_1QG8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QG8-query.scw
PDB file : Tito_Scwrl_1QG8.pdb: