Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLAILGFVMMIVFMYLIMSNRLSALIALIVVPIVFALISGFGKDLGEMMIQGVTDLAPTGIMLLFAILYFGIMIDSGLFDPLIAKILSFVKGDPLKIAVGTAVLTMTISLDGDGTTTYMITIAAMLPLYKRLGMNRLVLAGIAMLGSGVMNIIPWGGPTARVLASLKLDTSEVFTPLIPAMIAGILWVIAVAYILGKKERKRLGVISIDHAPSSDPEAAPLKRPALQWFNLLLTVALMAALITSLLPLPVLFMTAFAVALMVNYPNVKEQQKRISAHAGNALNVVSMVFAAGIFTGILSGTKMVDAMAHSLVSLIPDAMGPHLPLITAIVSMP---FTFFMSNDAFYFGVLPIIAEAASAYGIDAAEI-GRASLLGQPVHLLSPLVPSTYLLVGMAGVSFGDHQKFTIKWAVGTTIVMTIAALLIGIISF
6CP4 Chain:A ((165-233))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPI---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6CP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 131 -14365 -109.66 -221.00
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.41

3D Compatibility (PKB) : -109.66
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.41
QMean score : -0.056

(partial model without unconserved sides chains):
PDB file : Tito_6CP4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6CP4-query.scw
PDB file : Tito_Scwrl_6CP4.pdb: