Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFNPDRAADPMAIAGAFAVLFL---PYSLLGPFAGALMDRWDRRW-----------VLVGANTGRLALIAGVGTILAV--GAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVVTMNSVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVTGWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHV-------TARAVGGLGTALLFFAATGLGAFLANVL-----TPTAIRRWGRYATANGALAAA--------ATIQVAAAGLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDAL-------RGHVFAVQDALFWVSYI----LSITVAAALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR-- |
| 1CB7 Chain:B ((1-483)) | MELKNKKWTDEEFHKQREEVLQQWPTGKEVDLQEAVDYLKKIPAEKNFAEKLVLAKKK--GITMAQPRAGVALLDEHIELLRYLQDEGGADFLPSTIDAYTRQNRYDECENGIKESEKAGRSLLNGFPGVNFGVKGCR-KVLEAVNLPLQARHGTPDSRLLAEIIHAGGWTSNEGGGIS----YNVPYAKNVTIEKSLLDWQYCDRLVGFYEEQGVHINREPFGPLTGTLVP-PSMSNAVGITEALLAAE------------QG--VKNITVGYGECGNMIQDIAALRCLEEQTNEYLKAYGYNDVFVTTVFHQWMGGFPQDESKAFGVIVTATTIAALAGATKVIVKTPHEAIGIPTKEANAAGIKATKMALNMLEGQRMPMSKELETEMAVIKAETKCILDKMFELGKGDLAIGTVKAFETGVMDIPFGPSKYNAGKMMPVRDNLGCVRYLEFGNVPFTEEIKNYNRERLQERAKFEGRDVS-FQMVIDDIFAVGKGRLIGRPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -425907 for 3684 contacts (-115.6/contact) +
2D Compatibility (PS) -43838 + (NN) -4932 + (LL) 1828
1D Compatibility (HY) -6400 + (ID) 3250
Total energy: -482499.0 ( -130.97 by residue)
QMean score : 0.222
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