Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFD-GFPSSIIEGTYRENDMTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR |
3AEI Chain:A ((1-94)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEAVRAYELQLELQQIRTLRQSLELKMKELEYAEGIITSLKSERRIYRAFS--DLLVEITKDEAIEHIERSRLVYKREIEKLKKREKEIMEELSKL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8997 for 498 contacts (-18.1/contact) +
2D Compatibility (PS) -9800 + (NN) 712 + (LL) 7748
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -14837.0 ( -29.79 by residue)
QMean score : 0.044
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