Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAARNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPV----LTLYGIPHRDCGSYASGG---FATG--TDYRGWIDAVASGLGSSP---ATIIVEPDALA-MADCLSPDQ----RQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWL--------SAEAMAARLNDVGVGRA-RGFSLNVSNF----------YTTD----EEIGYGEAISGLTNG----SHYVIDTSRNGAGPAPDAPL-NWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGT-----------CGRGE-----PQAGRFVSQYAIDLAHNAGQ |
| 1GZ1 Chain:A ((44-359)) | ---------------------------------------------------------------------------------------------------------------------------VPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDL-PHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECDGTSDTTAARYAYHCGLEDALKPAPEAGQWFNEYFIQLLRNAN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55127 for 1957 contacts (-28.2/contact) +
2D Compatibility (PS) -27712 + (NN) -16893 + (LL) 8988
1D Compatibility (HY) -17200 + (ID) 4600
Total energy: -112544.0 ( -57.51 by residue)
QMean score : 0.391
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