Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MSNANFSILVDFAAGG----------LVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDN-----DRALIAVGIAVLALRALVLPWLLARAVGAEAAAQREA------------TPLVNTA-------SSLLITAG-----LTLTAFAITQPVVNLEPGVT-INAVPAAFAVVLIAL------FVMTTRLHAVSQA---------AGFLMLDNGIAATAFLLTAGVPLIVELGA--------------SLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD |
| 19HC Chain:A ((1-292)) | AALEPTDSGAPSAIVM-FPVGEKPNPKGAAMKPVVFNHLIHEKKIADCETCHHTGDPVSCSTCHTVEGKAEGDYITLDRAMHATDIAARAKGNT--PTSCVSCHQSETKERRECAGCHAITTPKDDEAWCATCHDITPSMTPSEMQKGIAGTLLPGDNEALAAETVLAEATVAPVSPMLAPYKVVIDALADKYEPSDFTHRRHLTSLMESIKDDKLAQAFHDKPEILCATCHHRSPLSLTPPKCGSCHTKEIDAADPGRPNLMAAYHLECMGCHKGMAVARPRDTDCTTCHKAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 19HC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127197 for 1236 contacts (-102.9/contact) +
2D Compatibility (PS) -21299 + (NN) 7432 + (LL) 292
1D Compatibility (HY) 4800 + (ID) 2250
Total energy: -138222.0 ( -111.83 by residue)
QMean score : 0.086
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