Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGLLLAAILAPLAASIASLITGWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLATAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITAFLVGHRR-TRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVL-IRLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAAAGT--TLAIAALLLHVLAHGIGKTVLFLAGGQLQA---AHDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAAGAPAITVPAT---AAAALMVGIVVSAALGITAGPLADLLGIAASNVGLP |
| 3RKO Chain:N ((62-483)) | --------------------------------------------------------DVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYN-------DNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSGD--------LSFVALGK-----NEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATA-SKIAIFGVVMRLFLYAPVGD-SEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQP-----SNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRLAMP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -446904 for 3691 contacts (-121.1/contact) +
2D Compatibility (PS) -42352 + (NN) -25629 + (LL) 6416
1D Compatibility (HY) -30800 + (ID) 4100
Total energy: -543369.0 ( -147.21 by residue)
QMean score : 0.303
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