Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLISLNALVFVMQVTVMGLERQLALW-----PPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSA-LGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARR-----LHLDVRWVVALIVINLA--FTFLAPAISWQGHVGGLVTGALVAATYVYAPRERRNLIQATVTITVLVAFVVLIGWRTVDLLALFGGRLNLS
4QNZ Chain:A ((4-185))
------------------------------RER-AGPVTWVMMIACVVVFIAMQI--LG-DQEVMLWLAWPFDPTLKF-EFWRYFTHALMHISLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPW---FGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLN------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153350 for 1303 contacts (-117.7/contact) +
2D Compatibility (PS) -17052 + (NN) -2802 + (LL) 5788
1D Compatibility (HY) -18000 + (ID) 2250
Total energy: -187666.0 ( -144.03 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_4QNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QNZ-query.scw
PDB file :
Tito_Scwrl_4QNZ.pdb
: