Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPN-GVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVA--VGEPVVAMGNSGGQGGTPRAVPGRVVALGQT-VQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTA--ASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIG-----PTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 3OTP Chain:A ((88-334)) | ------------------------------------------------------------------------------GSGVIIDADKGYVVTNNHVVDNATVIKV-QLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGET--VTSGIVSALGRSGLNA--------ENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNI---GIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAAL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107363 for 1729 contacts (-62.1/contact) +
2D Compatibility (PS) -25241 + (NN) -13646 + (LL) 5856
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -158644.0 ( -91.75 by residue)
QMean score : 0.308
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