Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MQRE---IYDGEARLSWVLAALAGILGATAFTHSAGYFVTFMTGNSQRAVLGLFGDDAWMSVTASLLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGVDIMLGGWHESMLDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGT---LVKMGQGIERHLAGGKVEDWLG---YFLLHASFVL-GAAAGGAISMVVTGPQMLAVAAVVCAATTGYTYLHADRRGLVNQKRPQPGKRLFRALRRGELDSGTSTPATNYGSS------------------- |
| 4P4M Chain:A ((92-378)) | KPKLKAIQELTQVHGFGPRAAAALFDREGIFTVDELLQKADS-IPSLTDQQRVGIKYFYDINEKIPMQESVLHENYLREKCMEVLGK---------------DFSILICGSYR----RRHPFSGDVDAILSRTLDAPPLSEPVAATGVLGHFVEFLESLKYLEATMAQGPLKYMGMGRLPPRINTKVYKARRVDIRLIETKSVPTAMLTFTGSKNFNVIMRQAAISKGYLL---NEYGLFKLGTPEEARGKNAGEELGVPKDELEDKRVEVRSEQDVFDVLGMPYAKPENRDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136794 for 1666 contacts (-82.1/contact) +
2D Compatibility (PS) -24762 + (NN) -2936 + (LL) 1740
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -167252.0 ( -100.39 by residue)
QMean score : 0.162
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