Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLNDIQVWTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGI-VGDRGGRAMVQSPILKQAFALDDGSCLDDP-RVSVPVYPARVTPEGRIQVARVAV
1FQT Chain:A ((4-107))
-------MKFTRVCDRRDVPEGEALKVES-GGTSVAIFNV-DGELFATQDRCTHGDW-SLSDGGYLEG----DVVECSLHMGKFCVRTGKVKSPPPCEALKIFPIRIED-NDVLVDFEA-
General information:
TITO was launched using:
RESULT:
Template:
1FQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75504 for 767 contacts (-98.4/contact) +
2D Compatibility (PS) -11396 + (NN) -6635 + (LL) 804
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -97781.0 ( -127.49 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_1FQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FQT-query.scw
PDB file :
Tito_Scwrl_1FQT.pdb
: