Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
1M4D Chain:B ((6-181))-----HTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW


General information:
TITO was launched using:
RESULT:

Template: 1M4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128715 for 1347 contacts (-95.6/contact) +
2D Compatibility (PS) -18941 + (NN) -8189 + (LL) 616
1D Compatibility (HY) -23600 + (ID) 8800
Total energy: -187629.0 ( -139.29 by residue)
QMean score : ?

(partial model without unconserved sides chains):
PDB file : Tito_1M4D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M4D-query.scw
PDB file : Tito_Scwrl_1M4D.pdb: