Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANSLLDFVISLVRDPEAAARYAANPERSIAEAHLTDVTRADVNSLIPVVSDSLSMSEPIGAAGGAHAGDRGNVWASGAATAALDAFAPHADAGVVQQHGAVGSVLNQPTPPGPGVTPTDPRPFRAGPHETSALLTSAEIPDTTSEDGGLPTDHPAVWNHPVVDPHTVEPDHHGYDIHG |
1PUE Chain:E ((3-17)) | ---RLYQFLLDLLRSGDM----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4952 for 55 contacts (-90.0/contact) +
2D Compatibility (PS) -1651 + (NN) -1488 + (LL) 5784
1D Compatibility (HY) -2800 + (ID) 200
Total energy: -5307.0 ( -96.49 by residue)
QMean score : 0.364
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