Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHHSFAYRSYSWY----------VDVDNLPQLPWWLRPFARFHADD----HFADPFSCPPHSSLRDRL--DAFFAA-----RGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR |
| 4M16 Chain:A ((2-226)) | AHHHHHHMVLNYFYPGTKTLKNKLGIMGYKQLEKRCKRNAKKVINSLRNEPLPETFDSSYLKYLHKRLFGSAFEWAGYTRDLSFAFDDGTIAQMSMMKIPGT-----DIYFAH--GDKIQENLKEFDEILASKS-------NLQGLSREDFIEETVKLFSFLNYIHPFRAGNEAVQHIFFEKLAEAAGHKLDFSVVTEERIMRACNDAMALKGEEAHQAMKSLFEDISNPEEVIILRDF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87084 for 1374 contacts (-63.4/contact) +
2D Compatibility (PS) -20714 + (NN) 4757 + (LL) 908
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -108383.0 ( -78.88 by residue)
QMean score : 0.057
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