Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRIGTRGSLLATTQAATVRDAL-IAG-GHSAELVTISTEGDRSMAPIASLGVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH
1GTK Chain:A ((5-307))VLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV---------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELID------G---EIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVY-


General information:
TITO was launched using:
RESULT:

Template: 1GTK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120074 for 2430 contacts (-49.4/contact) +
2D Compatibility (PS) -31851 + (NN) -23116 + (LL) 1136
1D Compatibility (HY) -20000 + (ID) 6300
Total energy: -200205.0 ( -82.39 by residue)
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_1GTK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GTK-query.scw
PDB file : Tito_Scwrl_1GTK.pdb: